Institut de Génétique et MicrobiologieQuery in the tandem repeats database
(bacteria)

genomes on 13/07/2014

Link to references for completed bacterial sequences http://www.genomesonline.org/

Important message : starting from 2009, publicly released genome sequences are not automatically imported in the database. Please contact us (gilles.vergnaud[at]u-psud.fr) if your favorite genome sequence is not included. We will then do the import within one or two working days.

If you want to see the most recent updates click below

1.     Select a chromosome :

Bacteria:


2.     Select a criterion :

L = total length
U = unit length
N = copy number
V = percent matches

Pos = physical position: kb
%GC = percent G+C
B = bias between strands

 

L
min :
max :

U
min :
max :

N
min :
max :

V
min :
max :

Pos
min :
max :

%GC
min :
max :

B
min :
max :

To ask for a strict value, write it twice (in "min" and "max")

Select bias:
ex: GC -> B = |%G-%C| / %(G+C)

3.     Select Query type :

Tandem repeats characteristics

Order results by :

Tandem repeats distribution

Distribution according to:

Step for physical distribution (according to "Pos"):

4.     Result :

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